Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_020156: Nonlabens dokdonensis DSW-6, complete genome

NCBI: NC_020156

Host Lineage: Nonlabens dokdonensis; Nonlabens; Flavobacteriaceae; Flavobacteriales; Bacteroidetes; Bacteria

General Information: Persicivirga dokdonensis, formerly Donghaeana dokdonensis, was isolated from seawater near the island of Dokdo in the East Sea, Korea.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
149666*7414124476Island text1.4663319.856536.996Neighbours21BLASTN+49666.gbk
214470719254447838Island text1.7090422.405135.3905Neighbours21BLASTN+144707.gbk
3585500*60383718338Island text1.6719319.962937.3858Neighbours21BLASTN585500.gbk
4709241*72978420544Island text1.5243425.439837.2498Neighbours21BLASTN+709241.gbk
573706378726250200Island text1.7271523.01633.2097Neighbours21BLASTN+737063.gbk
686140287909917698Island text1.9703918.692236.6062Neighbours21BLASTN861402.gbk
790375492804124288Island text1.5402320.865831.7822Neighbours21BLASTN903754.gbk
81032897105301820122Island text1.5317118.911131.2096Neighbours21BLASTN1032897.gbk
91220755123998919235Island text1.675320.04834.3525Neighbours21BLASTN1220755.gbk
101565500*158714221643Island text1.9225822.936336.2453Neighbours21BLASTN+1565500.gbk
112750000277216122162Island text2.8567920.267932.3843Neighbours21BLASTN2750000.gbk
123050423307178221360Island text2.342220.473634.383Neighbours21BLASTN+3050423.gbk
133157899*318105723159Island text1.4315419.953831.3558Neighbours21BLASTN+3157899.gbk
143670500369350423005Island text2.5304921.353539.9341Neighbours21BLASTN+3670500.gbk