Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_020075: Candidatus Blochmannia chromaiodes str. 640, complete genome

NCBI: NC_020075

Host Lineage: Blochmannia chromaiodes; Blochmannia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Endosymbiont of carpenter ants.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1114790*13461719828Island text1.5449316.640623.1544Neighbours21BLASTN114790.gbk
259048160950219022Island text2.446314.895431.4614Neighbours21BLASTN590481.gbk
363742065737119952Island text1.6649214.279326.6354Neighbours21BLASTN637420.gbk