Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_020051: Gloeocapsa sp. PCC 7428 plasmid pGLO7428.02, complete sequence

NCBI: NC_020051

Host Lineage: Gloeocapsa; Gloeocapsa; Microcystaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Environment: Fresh water; Isolation: moderate hot spring; Temp: Mesophile.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1318505360421755Island text1.515927.233818.4731Neighbours14BLASTN+31850.gbk