Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_019815: Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei

NCBI: NC_019815

Host Lineage: Kinetoplastibacterium crithidii; Kinetoplastibacterium; ; ; Proteobacteria; Bacteria

General Information: Endosymbiont of Angomonas deanei.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1114288*13709922812Island text3.9487621.928339.4846Neighbours21BLASTN114288.gbk
2589762*63168441923Island text1.7379415.745331.1642Neighbours21BLASTN589762.gbk
367959270094921358Island text3.5923621.020334.9555Neighbours21BLASTN+679592.gbk
4761480*78277421295Island text2.5765221.211737.7292Neighbours21BLASTN+761480.gbk
5782987*80605323067Island text1.7477418.430133.2344Neighbours21BLASTN782987.gbk