Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_019814: Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas

NCBI: NC_019814

Host Lineage: Kinetoplastibacterium blastocrithidii; Kinetoplastibacterium; ; ; Proteobacteria; Bacteria

General Information: Endosymbiont of Strigomonas culicis.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1125611*17345647846Island text2.2551121.798938.4261Neighbours21BLASTN125611.gbk
2320260*34015019891Island text1.8953716.92333.4876Neighbours314BLASTN320260.gbk
3678404*70167523272Island text3.6706821.166732.4236Neighbours314BLASTN678404.gbk