Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_019745: Gloeocapsa sp. PCC 7428, complete genome

NCBI: NC_019745

Host Lineage: Gloeocapsa; Gloeocapsa; ; Chroococcales; Cyanobacteria; Bacteria

General Information: Environment: Fresh water; Isolation: moderate hot spring; Temp: Mesophile.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
12346970237751330544Island text1.6207541.038733.535Neighbours117BLASTN2346970.gbk
23066177308807521899Island text1.5598136.918423.3951Neighbours117BLASTN3066177.gbk
33217552*324009922548Island text2.0637522.999820.3557Neighbours21BLASTN3217552.gbk
43778017379609918083Island text1.4727237.250733.1526BLASTN+3778017.gbk