Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_019697: Chamaesiphon minutus PCC 6605, complete genome

NCBI: NC_019697

Host Lineage: Chamaesiphon minutus; Chamaesiphon; ; Chroococcales; Cyanobacteria; Bacteria

General Information: Country: USA; Isolation: freshwater; Temp: Mesophile.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
11667908169045022543Island text1.6921139.96350.6199BLASTN+1667908.gbk
21696000171968823689Island text1.8463539.150752.3968BLASTN+1696000.gbk
31879769190261722849Island text1.483730.161749.3361BLASTN1879769.gbk
42067740208609918360Island text1.4492730.435348.5626BLASTN2067740.gbk
54108944413305224109Island text1.7271227.301238.5735BLASTN4108944.gbk