Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_018750: Streptomyces venezuelae ATCC 10712, complete genome

NCBI: NC_018750

Host Lineage: Streptomyces venezuelae; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces venezuelae strain ATCC 10712, isolated from soil in Caracas, Venezuela in about 1948, grows in a diffuse and homogenous manner in a variety of liquid media, and in some sporulates to near completion. This organism produces a number of secondary metabolites which may be of industrial or pharmaceutical interest. Soil actinomycete.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
177050079437823879Island text1.8881116.318514.3543Neighbours11BLASTN+770500.gbk
21092224*111223520012Island text1.8559914.465319.7771Neighbours11BLASTN1092224.gbk
31390029140825618228Island text1.5045314.348226.0507Neighbours11BLASTN+1390029.gbk
41591895*161414422250Island text1.915913.770719.0462Neighbours11BLASTN+1591895.gbk
51835500185771922220Island text1.5166516.61627.6389Neighbours11BLASTN1835500.gbk
62005229203059225364Island text1.5461421.941921.781Neighbours11BLASTN+2005229.gbk
72118907214335524449Island text3.0953817.471913.5827Neighbours11BLASTN2118907.gbk
82270314231346543152Island text1.8816414.786422.8512Neighbours11BLASTN2270314.gbk
92668783269022121439Island text1.5851112.46359.24595Neighbours11BLASTN+2668783.gbk
102696000*271359917600Island text1.8195413.627813.0284Neighbours11BLASTN2696000.gbk
113141196*316047319278Island text4.6442421.197927.0807Neighbours11BLASTN+3141196.gbk
123249756*327318823433Island text1.5481515.311914.4476Neighbours11BLASTN3249756.gbk
133315309333886923561Island text1.4961214.846813.4487Neighbours11BLASTN+3315309.gbk
143481476*351379932324Island text1.4347414.700926.4161Neighbours11BLASTN+3481476.gbk
153661243*368475823516Island text12.693428.83823.5626Neighbours11BLASTN3661243.gbk
163741581376849826918Island text1.5156215.783120.5445Neighbours11BLASTN3741581.gbk
173859127*387774018614Island text1.5001416.038411.8407Neighbours11BLASTN3859127.gbk
183964784*398396119178Island text1.4938717.509723.6326Neighbours11BLASTN3964784.gbk
193988196*400732519130Island text1.6830713.758511.4265Neighbours11BLASTN3988196.gbk
204311300*432914617847Island text1.5648213.676414.4597Neighbours11BLASTN+4311300.gbk
214333064436046827405Island text4.5804120.027229.7961Neighbours11BLASTN+4333064.gbk
224688968*471073821771Island text1.5667613.42729.85504Neighbours11BLASTN4688968.gbk
234728870*475950630637Island text3.2573219.948112.8783Neighbours11BLASTN+4728870.gbk
245078705510289824194Island text1.5461819.55524.8605Neighbours11BLASTN5078705.gbk
255114434513594121508Island text1.7457419.391422.6936Neighbours8BLASTN+5114434.gbk
265293829531859924771Island text1.6810915.367613.6974Neighbours11BLASTN+5293829.gbk
275399316*541712617811Island text1.5576114.629922.239Neighbours11BLASTN5399316.gbk
285828000*585027722278Island text2.6279618.036415.5821Neighbours11BLASTN5828000.gbk
296070260610109930840Island text1.4677218.160314.9714Neighbours11BLASTN+6070260.gbk
306132619616363731019Island text1.894914.434118.4376Neighbours11BLASTN+6132619.gbk
316192970621102318054Island text1.7790115.212419.7588Neighbours11BLASTN6192970.gbk
326237875626148023606Island text1.9476715.180814.7598Neighbours11BLASTN+6237875.gbk
336315802633862022819Island text1.6438113.436312.2792Neighbours11BLASTN+6315802.gbk
346588206661440326198Island text1.7912112.262914.21Neighbours11BLASTN+6588206.gbk
356717315674058623272Island text1.4905414.09913.3268Neighbours11BLASTN6717315.gbk
366869675689368924015Island text2.4738116.905717.7854Neighbours11BLASTN+6869675.gbk
376950695697113120437Island text1.7831313.45769.7454Neighbours8BLASTN+6950695.gbk
387540450756160921160Island text1.393217.296916.7925Neighbours11BLASTN+7540450.gbk
397653000767667323674Island text1.5564517.110932.8152Neighbours11BLASTN+7653000.gbk
407913600793264719048Island text1.5238116.321118.1995Neighbours11BLASTN7913600.gbk
418210500823849928000Island text2.0403715.620911.1408Neighbours11BLASTN+8210500.gbk