Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_018748: Emticicia oligotrophica DSM 17448 chromosome, complete genome

NCBI: NC_018748

Host Lineage: Emticicia oligotrophica; Emticicia; Cytophagaceae; Cytophagales; Bacteroidetes; Bacteria

General Information: Country: India; Environment: Fresh water; Isolation: Warm spring water; Temp: Mesophile. An aquatic bactreium isolated from a water sample collected in Assam, India.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1181937*20540123465Island text1.6421418.660528.4121Neighbours21BLASTN+181937.gbk
249501151371918709Island text1.5960418.707430.2717Neighbours21BLASTN495011.gbk
31311465*133609324629Island text1.4999222.726223.6828BLASTN1311465.gbk
41400068*142609926032Island text2.6120225.709840.9771Neighbours21BLASTN1400068.gbk
51443176146672123546Island text1.703120.415930.7102Neighbours21BLASTN1443176.gbk
61842400186375321354Island text1.6606918.432826.541Neighbours21BLASTN+1842400.gbk
71916012*193882322812Island text2.2142417.57632.0597Neighbours21BLASTN1916012.gbk
82119679*214650626828Island text2.6407223.514835.8144Neighbours21BLASTN2119679.gbk
93187233320509917867Island text2.1585116.418416.3905Neighbours21BLASTN+3187233.gbk