Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_018721: Psychroflexus torquis ATCC 700755 chromosome, complete genome

NCBI: NC_018721

Host Lineage: Psychroflexus torquis; Psychroflexus; Flavobacteriaceae; Flavobacteriales; Bacteroidetes; Bacteria

General Information: Psychroflexus torquis is psychophilic and is an algal epiphyte. The microbe is a chemoheterotroph and requires seawater to grow and is motile by a gliding motility mechanism. Colonies produce an orange carotenoid-like pigment.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
129790632028722382Island text1.4903126.326736.4808Neighbours21BLASTN297906.gbk
286553088494719418Island text2.1057524.120932.0642Neighbours21BLASTN865530.gbk
394380196680623006Island text1.4953316.287729.3458Neighbours21BLASTN943801.gbk
41027396105243025035Island text1.4571516.287728.5601Neighbours21BLASTN+1027396.gbk
51071066*108982118756Island text1.4294618.713527.3054Neighbours21BLASTN1071066.gbk
62017737*204009922363Island text1.7280915.766929.8636Neighbours21BLASTN+2017737.gbk
72573897259326919373Island text1.7885815.822633.4389Neighbours21BLASTN2573897.gbk
82759700*278187922180Island text1.9606116.342422.856Neighbours21BLASTN+2759700.gbk
92872780289192019141Island text2.1884524.698532.2538Neighbours21BLASTN+2872780.gbk
103155579317377118193Island text1.6020116.916627.1531Neighbours21BLASTN+3155579.gbk