Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_018697: Cycloclasticus sp. P1 chromosome, complete genome

NCBI: NC_018697

Host Lineage: Cycloclasticus; Cycloclasticus; Piscirickettsiaceae; Thiotrichales; Proteobacteria; Bacteria

General Information: Cycloclasticus sp. (strain P1) is an aerobic, Gram-positive bacterium isolated from isolated from deep-sea sediments of the Pacific ocean enriched by pyrene.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1361339*38386822530Island text1.9046231.711648.5747Neighbours42BLASTN+361339.gbk
250591552609620182Island text1.540528.786248.2257Neighbours21505915.gbk
361883264338524554Island text1.9220427.865142.6544Neighbours42BLASTN+618832.gbk
482505884406019003Island text1.777635.796351.7575Neighbours21BLASTN+825058.gbk
51343756*139248048725Island text1.6249928.19847.5332Neighbours42BLASTN+1343756.gbk
62055725*207885823134Island text1.6850833.757837.6866Neighbours314BLASTN+2055725.gbk