Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_018677: Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, complete

NCBI: NC_018677

Host Lineage: Portiera aleyrodidarum; Portiera; Halomonadaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Candidatus Portiera aleyrodidarum is the primary symbionts of whitefly.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
173254*10559932346Island text4.2271518.424333.5573Neighbours21BLASTN+73254.gbk
2111500*14809936600Island text2.2203417.411330.7073Neighbours21BLASTN111500.gbk
3329829*35599926171Island text1.7707116.777833.4791Neighbours21BLASTN329829.gbk