Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_018665: Exiguobacterium antarcticum B7 chromosome, complete genome

NCBI: NC_018665

Host Lineage: Exiguobacterium antarcticum; Exiguobacterium; Bacillales Family XII; Bacillales; Firmicutes; Bacteria

General Information: Exiguobacterium antarcticum (strain B7) is a psychotropic Gram-positive bacterium isolated from microbial biofilm at Ginger Lake, located on King George Island, Antarctic peninsula.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
11*2938529385Island text1.731931.807356.2465Neighbours324BLASTN1.gbk
271677*9339521719Island text1.7195633.880954.9155Neighbours324BLASTN71677.gbk
3139646*15884819203Island text1.6345234.384151.3613Neighbours324BLASTN+139646.gbk
442245144240019950Island text1.726435.095550.0503Neighbours324BLASTN422451.gbk
5650847*66859917753Island text1.625333.411454.1448Neighbours324BLASTN650847.gbk
61233084125609923016Island text1.5794928.6622.0246Neighbours37BLASTN+IslandViewer 1233084.gbk
72163713218774224030Island text2.1656327.757224.7229Neighbours324BLASTN+2163713.gbk
82563375*258672623352Island text1.8538936.725850.9838Neighbours324BLASTN2563375.gbk