Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_018605: Cardinium endosymbiont cPer1 of Encarsia pergandiella, complete

NCBI: NC_018605

Host Lineage: Cardinium endosymbiont of Encarsia pergandiella; Cardinium; Amoebophilaceae; Cytophagales; Bacteroidetes; Bacteria

General Information: This bacterium is often located within the reproductive tissues of the host. It is often found with other arthropod-associated Bacteroidetes that alter host biology (ex. Wolbachia). Distantly related hosts can harbor closely related Cardinium. Closely related Cardinium also tend to cluster with closely related hosts. Current research has shown 'Cardinium' to be an endosymbiot capable of altering host sexuality, resultant offspring as well as possible antibiotic resistance.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1558391*58168123291Island text2.2105516.31939.52717Neighbours21BLASTN+558391.gbk
284650087277726278Island text3.2549820.202617.2522Neighbours21BLASTN+846500.gbk