Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_018419: Secondary endosymbiont of Ctenarytaina eucalypti chromosome,

NCBI: NC_018419

Host Lineage: secondary endosymbiont of Ctenarytaina eucalypti; aphid secondary symbionts; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Insect endosymbiont, Endosymbiotic intracellular, Gram negative.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
122600024809922100Island text1.4898437.232538.1228BLASTN+226000.gbk
2428000*44959921600Island text1.6077645.732741.0261BLASTN428000.gbk
350950052986620367Island text1.5084633.53636.8193BLASTN509500.gbk
486250088609923600Island text1.7232538.870848.5593BLASTN862500.gbk
51110000*113209922100Island text1.4595535.189747.2713BLASTN+1110000.gbk
61397914*141909921186Island text1.6151336.088540.0587Neighbours21BLASTN1397914.gbk