Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_018265: Melissococcus plutonius DAT561 plasmid 1, complete sequence

NCBI: NC_018265

Host Lineage: Melissococcus plutonius; Melissococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Insect pathogen. Causative agent of European foulbrood. European foulbrood is a disease of honeybee larvae, caused by the bacterium Melissococcus plutonius. It is found on all continents where bees are raised and an economically important disease in many honey-producing countries. Infected larvae usually die rapidly when they are 3-5 days old and in severe cases entire colonies can be lost. Melissococcus plutonius (strain DAT561) is a anaerobic or microaerophilic Gram-positive bacterium.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1756589419118534Island text1.685211.575920.1425Neighbours21BLASTN+75658.gbk