Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_017292: Chlamydophila psittaci 02DC15 chromosome, complete genome

NCBI: NC_017292

Host Lineage: Chlamydia psittaci; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: This organism was previously called Rickettsia psittaci, Chlamydia psittaci or Ehrlichia psittaci. Usually these type of human infections occur when in close contact with infected birds (poultry workers, pet owners), although instances of person to person transmission have been found.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1269297*29375424458Island text1.6210922.936341.5832Neighbours314BLASTN+269297.gbk
271605073589219843Island text1.5810920.376341.0951Neighbours314BLASTN+716050.gbk
3834749*85359918851Island text1.5150122.251943.3914Neighbours314BLASTN834749.gbk
41096730*111715820429Island text1.9554324.14737.8947Neighbours314BLASTN1096730.gbk