Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_017096: Caldisericum exile AZM16c01, complete genome

NCBI: NC_017096

Host Lineage: Caldisericum exile; Caldisericum; Caldisericaceae; Caldisericales; Caldiserica; Bacteria

General Information: Caldisericum exile is an anaerobic, thermophilic, thiosulfate-reducing bacterium, isolated from a hot spring in Japan.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
126033327916518833Island text1.5463717.812223.8884Neighbours21260333.gbk
2779550*80238122832Island text2.3430728.87232.6443Neighbours21BLASTN779550.gbk
31081904*111554233639Island text1.5228616.874425.5208Neighbours21BLASTN+1081904.gbk
41147441117091123471Island text1.7845320.184833.9882Neighbours21+1147441.gbk