Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_017060: Rahnella aquatilis HX2 plasmid PRA1, complete sequence

NCBI: NC_017060

Host Lineage: Rahnella aquatilis; Rahnella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Rahnella aquatilis is a facultatively anaerobic, nitrogen-fixing, gram-negative rod from the Enterobacteriaceae family. It is usually found in fresh water. It is sometimes found in human clinical specimens.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
15950010978450285Island text2.6164240.392323.8987Neighbours41BLASTN+59500.gbk
212548017039644917Island text1.7113736.42735.7739Neighbours51BLASTN+125480.gbk