Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_016625: Burkholderia sp. YI23 chromosome 2, complete sequence

NCBI: NC_016625

Host Lineage: Burkholderia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Burkholderia sp. strain YI23 has been identified as a Fenitrothion degrader. Isolated from a golf course soil in Yongin, Kyongggi-do, South Korea.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
117134120170330363Island text1.7223626.18827.0888Neighbours11BLASTN+171341.gbk
294492596309918175Island text1.5240926.440927.9328Neighbours11BLASTN+944925.gbk
31259778*128398324206Island text1.608324.760927.2968Neighbours11BLASTN+1259778.gbk