Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_016620: Bacteriovorax marinus SJ, complete genome

NCBI: NC_016620

Host Lineage: Bacteriovorax marinus; Bacteriovorax; Bacteriovoracaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This bacterium is an unusual species which parasitizes other gram negative bacteria during its growth phase. It has a highly motile free-living extracelluar phase during which it seeks out new hosts.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
124354*4809923746Island text1.5298919.339725.2589Neighbours21BLASTN24354.gbk
234169938374642048Island text2.1694323.019134.8429Neighbours314BLASTN341699.gbk
378199580508923095Island text1.8657521.75840.3903Neighbours21BLASTN781995.gbk
43259749*329013130383Island text1.5340318.038725.6852Neighbours21BLASTN3259749.gbk