Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_016614: Vibrio sp. EJY3 chromosome 2, complete sequence

NCBI: NC_016614

Host Lineage: Vibrio; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: The Vibrio sp. EJY3 can grow using 3,6-anhydrogalactose as a sole carbon source. Using this competency, the expense of carbon source for industrial products could be reduced.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
168688770609919213Island text1.7751836.313150.0575Neighbours21BLASTN+686887.gbk
2822715*84646023746Island text1.5476528.015625.7431Neighbours21BLASTN822715.gbk
31152500117310220603Island text1.8392827.799715.5013Neighbours21BLASTN+1152500.gbk
41178000121761939620Island text2.3063228.14819.4824Neighbours41BLASTN+1178000.gbk
51543333*156763024298Island text2.2376930.802430.2468Neighbours41BLASTN+1543333.gbk