Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_016590: Burkholderia sp. YI23 chromosome 3, complete sequence

NCBI: NC_016590

Host Lineage: Burkholderia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Burkholderia sp. strain YI23 has been identified as a Fenitrothion degrader. Isolated from a golf course soil in Yongin, Kyongggi-do, South Korea.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
154831256816419853Island text1.7219827.262324.7399Neighbours11BLASTN+548312.gbk
21183470121038726918Island text1.492220.953927.0283Neighbours11BLASTN+1183470.gbk
31380092140024520154Island text1.884828.699530.072Neighbours11BLASTN+1380092.gbk