Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_016514: Enterobacter cloacae EcWSU1 chromosome, complete genome

NCBI: NC_016514

Host Lineage: Enterobacter cloacae; Enterobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: These "ICU bugs" cause significant morbidity and mortality, and infection management is complicated by multiple antibiotic resistance. These bacteria possess inducible beta-lactamases, which are undetectable in vitro but are also responsible for resistance during treatment



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1506611*54049933889Island text1.3863640.126550.871Neighbours41BLASTN+506611.gbk
2891772*93536443593Island text1.5076336.551645.4867Neighbours41BLASTN+891772.gbk
31142607117636533759Island text2.5454841.84127.4171Neighbours41BLASTN+1142607.gbk
41183356120741724062Island text1.4748734.338554.1479Neighbours41BLASTN1183356.gbk
51627664*165114223479Island text2.5364441.702925.9558Neighbours51BLASTN1627664.gbk
61701273*172009618824Island text2.1204141.570224.4683Neighbours51BLASTN+1701273.gbk
72079975210629326319Island text1.4289939.281420.4593Neighbours51BLASTN+2079975.gbk
82334870235552720658Island text1.5701934.746436.4079Neighbours51BLASTN+2334870.gbk
92387312241181824507Island text1.5108630.879126.0446Neighbours41BLASTN+2387312.gbk
102476359251313536777Island text2.3701241.16222.8103Neighbours41BLASTN+2476359.gbk
112647984*267879530812Island text1.6802235.468329.1682Neighbours51BLASTN+2647984.gbk
122713834*277632362490Island text1.6973835.493232.314Neighbours41BLASTN+2713834.gbk
132950860*298115230293Island text1.7032236.902724.5589Neighbours51BLASTN+2950860.gbk
143048883308013031248Island text1.5209331.158820.9587Neighbours41BLASTN3048883.gbk
153573400*361841545016Island text2.2895641.35533.4956Neighbours41BLASTN+3573400.gbk