Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_016078: Pelagibacterium halotolerans B2 chromosome, complete genome

NCBI: NC_016078

Host Lineage: Pelagibacterium halotolerans; Pelagibacterium; Hyphomicrobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Isolated from a seawater sample collected from the East China Sea. Pelagibacterium halotolerans is an marine, aerobic, motile, halophilic, Gram-negative bacterium.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
171500573844423440Island text1.9782417.731632.7141Neighbours11BLASTN+715005.gbk
2913713*93922125509Island text1.8518932.10423.0273Neighbours11BLASTN+IslandViewer 913713.gbk
33130573*315342222850Island text2.2566232.983741.5011Neighbours11BLASTNIslandViewer 3130573.gbk