Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_015964: Haemophilus parainfluenzae T3T1, complete genome

NCBI: NC_015964

Host Lineage: Haemophilus parainfluenzae; Haemophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: This is a slow-growing Gram negative bacteria that is a normal part of the human oropharyngeal flora. It is a cause of endocarditis in children.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
11389628*140919019563Island text1.9304732.134646.9074Neighbours21BLASTN1389628.gbk