Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_015963: Enterobacter asburiae LF7a plasmid pENTAS01, complete sequence

NCBI: NC_015963

Host Lineage: Enterobacter asburiae; Enterobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enterobacter asburiae strains have been isolated from a variety of human clinical specimens. The organisms are gram-negative, oxidase-negative, nonmotile, fermentative, nonpigmented rods.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
145002599221493Island text3.4037647.886816.7499Neighbours41BLASTN4500.gbk
211717814980332626Island text5.1549752.675921.9257Neighbours41BLASTN+117178.gbk