Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_015946: Mycoplasma putrefaciens KS1 chromosome, complete genome

NCBI: NC_015946

Host Lineage: Mycoplasma putrefaciens; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: Mycoplasma putrefaciens KS1 (ATCC 15718) was isolated from a goat with arthritis. Mycoplasma putrefaciens causes mastitis in goats. This organism can also cause abortion and arthritis in goats.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
164500*8667722178Island text1.7748615.657825.4531NeighboursBLASTN64500.gbk
262968165574326063Island text1.658217.455523.7153NeighboursBLASTN629681.gbk