Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_015945: Muricauda ruestringensis DSM 13258 chromosome, complete genome

NCBI: NC_015945

Host Lineage: Muricauda ruestringensis; Muricauda; Flavobacteriaceae; Flavobacteriales; Bacteroidetes; Bacteria

General Information: Country: Germany; Isolation: Seawater sediment suspension containing; Temp: Mesophile; Temp: 30C. Muricauda ruestringensis is an aquatic bacterium originally isolated from coastal sediment from the North Sea. This organism produces a long thick appendage which is an extension of the outer membrane.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1218326*23859320268Island text2.3321121.686522.1738Neighbours21BLASTN+218326.gbk
2708968*73426525298Island text1.929923.620337.0238Neighbours21BLASTN708968.gbk
31908895*193209923205Island text2.3301521.80223.6691Neighbours21BLASTNIslandViewer 1908895.gbk