n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)
n0_4mer:D = Distance between local and global OU patterns
n0_4mer:PS = Distance between 2 strands of same DNA molecule
Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS
NC_015931: Pyrolobus fumarii 1A, complete genome
NCBI: NC_015931
Host Lineage: Pyrolobus fumarii; Pyrolobus; Pyrodictiaceae; Desulfurococcales; Crenarchaeota; Archaea
General Information: Environment: Deep sea, Hydrothermal vent, Marine; Isolation: Hydrothermally heated black smoker wall; Temp: Hyperthermophile; Temp: 106C. Pyrolobus fumarii is an obligate chemolithotroph, gaining energy from the oxidation of hydrogen. This organism can grow at temperatures as high as 113 degrees C.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!