n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)
n0_4mer:D = Distance between local and global OU patterns
n0_4mer:PS = Distance between 2 strands of same DNA molecule
Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS
NC_015930: Lactococcus garvieae ATCC 49156, complete genome NCBI: NC_015930 Host Lineage: Lactococcus garvieae; Lactococcus; Streptococcaceae; Lactobacillales; Firmicutes; Bacteria General Information: Lactococcus garviae is responsible for mastitis in cows and buffalos, and it has been isolated from clinical specimens of human blood, urine, and skin. Lactococcus garvieae is also a well recognized bacterial fish pathogen. L. garvieae as the etiological agent of a hemorrhagic septicemia in farmed trout that was characterized by bilateral exophthalmos, darkening of the skin, congestion of the intestine, liver, kidney, spleen, and brain.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!