Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_015919: Borrelia bissettii DN127 plasmid lp54, complete sequence

NCBI: NC_015919

Host Lineage: Borrelia bissettii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Borrelia bissettii DN127 was isolated from a western blackleg tick, Ixodes pacificus, in California. This strain has pattern of outer surface proteins that is different from many other North American strains. Human pathogen.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
111437214372Island text2.140614.003229.5999Neighbours21BLASTN1.gbk
2368905849921610Island text1.9833213.016825.0457Neighbours21BLASTN36890.gbk