Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_015857: Brucella pinnipedialis B2/94 chromosome chromosome 1, complete

NCBI: NC_015857

Host Lineage: Brucella pinnipedialis; Brucella; Brucellaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Brucella pinnipedialis has been isolated from seals, porpoises and other marine mammals. This organism can be isolated from skin, blood, spleen and lymph nodes although the pathogenesis of this organism has yet to be determined.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1265721*28968623966Island text1.6278329.909925.739Neighbours11BLASTN+IslandViewer 265721.gbk
2531314*55683525522Island text1.997728.929129.9082Neighbours11BLASTN+IslandViewer 531314.gbk
373198275422322242Island text1.4687228.131121.4582Neighbours11BLASTN+IslandViewer 731982.gbk
4963570*98905725488Island text1.6703231.146125.6954Neighbours11BLASTN+IslandViewer 963570.gbk
51609670*163209922430Island text1.8617930.671240.8789Neighbours11BLASTN+1609670.gbk
61809500*183566226163Island text1.7317629.799634.0585Neighbours11BLASTN+IslandViewer 1809500.gbk
71954173*197850224330Island text2.1022938.216929.262Neighbours41BLASTN+IslandViewer 1954173.gbk