Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_015844: Zobellia galactanivorans, complete genome

NCBI: NC_015844

Host Lineage: Zobellia galactanivorans; Zobellia; Flavobacteriaceae; Flavobacteriales; Bacteroidetes; Bacteria

General Information: Zobellia galactanivorans is a marine bacterium that participates in the carbon cycle as a decomposer of dead algae. This organism produces several potentially commercially important polysaccharidases which are able to degrade agar and carageenan.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
11100664*112210921446Island text1.8681935.82250.2985Neighbours28BLASTN1100664.gbk
21188360*120898320624Island text2.0145626.505825.0421Neighbours21BLASTN1188360.gbk
31642000166453522536Island text1.52627.292142.289Neighbours281642000.gbk
43159046318211623071Island text2.623525.68429.3702Neighbours21BLASTN+IslandViewer 3159046.gbk
53524175*357558351409Island text2.4555729.34822.0755Neighbours21BLASTN+IslandViewer 3524175.gbk
63580591360013819548Island text2.9638526.319319.7771Neighbours21BLASTN+IslandViewer 3580591.gbk
73779500379809918600Island text2.9161426.849817.5722Neighbours21BLASTN+IslandViewer 3779500.gbk
83899500391832418825Island text2.0516626.500231.5934Neighbours21BLASTNIslandViewer 3899500.gbk
95375784539517319390Island text1.7422527.140128.3591Neighbours215375784.gbk