Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_015673: Corynebacterium resistens DSM 45100 chromosome, complete genome

NCBI: NC_015673

Host Lineage: Corynebacterium resistens; Corynebacterium; Corynebacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: A multidrug-resistant coryneform bacterium isolated from human infections. Isolated from a blood culture of samples taken from a patient with acute myelocytic leukemia.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
11*2009920099Island text1.5129228.827230.7681Neighbours19BLASTN+IslandViewer 1.gbk
2106038*12809922062Island text1.7608830.848747.1883Neighbours11BLASTN+IslandViewer 106038.gbk
328957831914029563Island text2.3064139.786932.6947Neighbours11BLASTN+IslandViewer 289578.gbk
4397947*42438426438Island text1.5231628.867937.2294Neighbours11BLASTN+397947.gbk
5464630*49232127692Island text1.6159131.866542.321Neighbours11BLASTN464630.gbk
652563854925123614Island text1.6012730.724741.7335Neighbours11BLASTN+525638.gbk
759398261518121200Island text1.9584728.790749.4655Neighbours11BLASTN+593982.gbk
870941173265823248Island text2.0012336.70134.0373Neighbours14BLASTN+709411.gbk
91038673106209923427Island text1.6310227.647743.7812Neighbours11BLASTN+IslandViewer 1038673.gbk
101794590181862424035Island text1.4574531.657344.6218Neighbours11BLASTN+IslandViewer 1794590.gbk
112206881*223129524415Island text3.5339345.669738.0599BLASTN+IslandViewer 2206881.gbk