Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_015567: Serratia sp. AS9 chromosome, complete genome

NCBI: NC_015567

Host Lineage: Serratia plymuthica; Serratia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environment: Host; Isolation: Rapeseed plant; Temp: Mesophile. promotes plant growth and inhibits plant pathogens.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
169190*9503025841Island text3.6019243.808427.4345Neighbours41BLASTN+IslandViewer 69190.gbk
231303533628323249Island text1.530632.028242.2037Neighbours51BLASTN313035.gbk
334650038359937100Island text2.9086842.299536.6405Neighbours41BLASTN+IslandViewer 346500.gbk
4547500*