Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_015559: Marinomonas posidonica IVIA-Po-181 chromosome, complete genome

NCBI: NC_015559

Host Lineage: Marinomonas posidonica; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Country: Spain; Environment: Marine; Temp: Mesophile; Isolation: seagrass from different meadows.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
11478114150289624783Island text1.5607332.083946.18Neighbours42BLASTN+1478114.gbk
21960129198754527417Island text1.4951731.584451.7359Neighbours325BLASTN+1960129.gbk
32434000*245725923260Island text1.3881534.721553.4413Neighbours42BLASTN2434000.gbk
42745570276476819199Island text2.0370229.470754.3002Neighbours42BLASTN2745570.gbk
53511231353107519845Island text1.662130.628350.5482Neighbours42BLASTN+3511231.gbk
63645181366972124541Island text1.4644733.432649.1107Neighbours42BLASTN+3645181.gbk