Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_015516: Melissococcus plutonius ATCC 35311, complete genome

NCBI: NC_015516

Host Lineage: Melissococcus plutonius; Melissococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Melissococcus plutonius is a bacterium that infects the midgut of the bee larvae. M. plutonius is a one-genus, one-species bacterium and the etiological agent of European foulbrood of the honeybee.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1131564*15661425051Island text1.6727716.772326.916Neighbours21BLASTN+131564.gbk
21222632*124617823547Island text1.497316.634222.4205Neighbours21BLASTN1222632.gbk
31467136149482827693Island text1.8064616.182829.8839Neighbours21BLASTN+1467136.gbk
41518000154026422265Island text1.7456314.536731.8979Neighbours21BLASTN+1518000.gbk
51801500*182053219033Island text1.5889415.882426.7085Neighbours21BLASTN1801500.gbk