Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_015389: Coriobacterium glomerans PW2 chromosome, complete genome

NCBI: NC_015389

Host Lineage: Coriobacterium glomerans; Coriobacterium; Coriobacteriaceae; Coriobacteriales; Actinobacteria; Bacteria

General Information: Country: Germany; Environment: Host, Intestinal tract; Isolation: Intestinal tract of the red soldier bug; Temp: Mesophile; Temp: 30C. Coriobacterium glomerans has been found in the gut of the red soldier bug (Pyrrhocoris apterus) and is believed to be a symbiont of this insect.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
111446913922524757Island text1.7249429.03724.534Neighbours11BLASTN+114469.gbk
217540619807822673Island text1.9234932.884829.4724Neighbours11BLASTN+IslandViewer 175406.gbk
348128250456923288Island text1.7319826.024422.2134Neighbours11BLASTN481282.gbk
453400055624722248Island text1.6005227.851450.6883Neighbours11BLASTN+534000.gbk
561643068847772048Island text2.3407836.040426.3137Neighbours11BLASTN+IslandViewer 616430.gbk
6809474*85204242569Island text1.6877429.214527.6799Neighbours11BLASTN+809474.gbk
7905165*92916824004Island text1.7324425.632333.8653Neighbours11BLASTN+905165.gbk
81070500110560635107Island text1.7634230.146923.8904Neighbours11BLASTN1070500.gbk
91298689*133142232734Island text4.2633645.16728.7284Neighbours11BLASTN+IslandViewer 1298689.gbk
101375315*141136436050Island text3.28438.67437.3581Neighbours11BLASTNIslandViewer 1375315.gbk
111610756*163481424059Island text1.9101631.110232.6764Neighbours11BLASTN+IslandViewer 1610756.gbk
121782825180592423100Island text1.8124829.606525.5327Neighbours11IslandViewer 1782825.gbk
131858732188542626695Island text1.9478229.234132.4538Neighbours11BLASTN1858732.gbk
141977736200820030465Island text2.6562838.255919.2121Neighbours11BLASTNIslandViewer 1977736.gbk
152030154*207584945696Island text2.0828832.35923.8131Neighbours11BLASTN+IslandViewer 2030154.gbk
162101841*212999928159Island text1.6985829.546427.0228Neighbours11BLASTN2101841.gbk