Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014970: Mycoplasma haemofelis str. Langford 1, complete genome

NCBI: NC_014970

Host Lineage: Mycoplasma haemofelis; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: Mycoplasma haemofelis, formerly Haemobartonella felis, causes an infectious anemia in cats. Antibiotic treatment can control acute infection, although latent infection persists. This disease is most commonly transmitted by infected fleas, however it may also be transmitted from a mother cat to her kittens, and through bites.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
128599530927423280Island text1.4056920.421936.5818Neighbours21285995.gbk
233595935840822450Island text1.4772422.118234.584Neighbours21BLASTN335959.gbk
3530748*54983219085Island text1.6478719.51232.5923Neighbours21BLASTN530748.gbk
459307861872425647Island text1.8372620.642937.9377Neighbours21BLASTN593078.gbk
562863767502146385Island text1.7541520.816836.9681Neighbours21BLASTN628637.gbk
670039571992419530Island text1.6348519.196934.6936Neighbours36BLASTN700395.gbk
776622978733521107Island text1.599721.007330.7285Neighbours21766229.gbk
887972089871318994Island text1.8508819.868736.262Neighbours21BLASTN879720.gbk
992824094771719478Island text1.7647319.981833.7572Neighbours21BLASTN928240.gbk
1095420897454220335Island text1.9241319.507936.3838Neighbours21BLASTN954208.gbk