Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_014921: Mycoplasma fermentans M64 chromosome, complete genome

NCBI: NC_014921

Host Lineage: Mycoplasma fermentans; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: Mycoplasma fermentans has been isolated from the respiratory and urogenital tract, primarily from immunocompromised patients and may be a factor in the progression of HIV infection to AIDS. In addition this organism can be detected in the blood and joints of patients with rheumatoid arthritis.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
122828*4091318086Island text1.5032915.217719.4664Neighbours21BLASTN+22828.gbk
2313312*33309919788Island text1.5459316.223225.1724Neighbours21BLASTN313312.gbk
339777142383126061Island text2.3529912.83421.2413Neighbours21BLASTN397771.gbk
448155950768526127Island text2.3996812.826821.3607Neighbours21BLASTN+IslandViewer 481559.gbk
5688978*71809929122Island text3.3340619.772928.7741Neighbours21BLASTN688978.gbk
6777047*80277425728Island text3.5902317.081624.2504Neighbours21BLASTN+777047.gbk
783033485428823955Island text1.9700412.987322.4754Neighbours21BLASTN830334.gbk
887922890562126394Island text2.4702512.800321.8084Neighbours21BLASTN+IslandViewer 879228.gbk