Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014829: Bacillus cellulosilyticus DSM 2522 chromosome, complete genome

NCBI: NC_014829

Host Lineage: Bacillus cellulosilyticus; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Soil; Temp: Mesophile; Temp: 37C. Bacillus cellulosilyticus strain DSM 2522 is alkaliphilic strain used in industry. The strain is isolated from soil. This alkiphilic species produces alkaline cellulase.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1133305*17500741703Island text1.8210224.966135.102Neighbours21BLASTN+133305.gbk
2178000*20009922100Island text1.8710821.865933.2562Neighbours21BLASTN+178000.gbk
3259707*28232822622Island text1.4793623.504435.6743Neighbours21BLASTN+259707.gbk
440510442824523142Island text1.8624925.631338.9334Neighbours21BLASTN+405104.gbk
544350047084427345Island text1.8366427.836736.7639Neighbours21BLASTN443500.gbk
672200074017718178Island text1.5270623.692935.5433Neighbours21BLASTN722000.gbk
7988980101226423285Island text2.0042924.499435.9636Neighbours21BLASTN+988980.gbk
81154520117779923280Island text2.1350626.000141.4036Neighbours21BLASTN+1154520.gbk
91376253*139509918847Island text2.0258723.388939.6257Neighbours21BLASTN+1376253.gbk
101475000149459919600Island text1.856523.746636.1116Neighbours21BLASTN+1475000.gbk
111526401*154452218122Island text1.7793722.963337.6721Neighbours21BLASTN1526401.gbk
121574739159371918981Island text1.7633123.273329.8087Neighbours21BLASTN1574739.gbk
132915500*293560620107Island text2.0436523.797935.994Neighbours21+2915500.gbk
143305762*332845522694Island text2.2677623.404138.2751Neighbours21BLASTN+3305762.gbk
153562478358200919532Island text1.6228323.133531.904Neighbours21BLASTN+3562478.gbk
163741843376064218800Island text1.507924.647432.6319Neighbours21BLASTN+3741843.gbk
173772914*379159918686Island text1.8061922.857932.641Neighbours21BLASTN3772914.gbk
183822125*385383631712Island text1.9016522.714834.087Neighbours21BLASTN+3822125.gbk
193877701389963821938Island text2.1317425.07936.3791Neighbours21BLASTN3877701.gbk
203964616*399070726092Island text1.8583826.563334.6158Neighbours21BLASTN+3964616.gbk
214016000403798721988Island text1.9615725.074839.5704Neighbours21BLASTN4016000.gbk
224057318407582518508Island text1.5217824.165633.7252Neighbours21BLASTN4057318.gbk
234088494410901720524Island text1.6602523.924934.9068Neighbours21BLASTN+4088494.gbk
244293583431216618584Island text1.8688923.303741.1256Neighbours21BLASTNIslandViewer 4293583.gbk
254346500439031543816Island text1.8156427.255933.3203Neighbours21BLASTN4346500.gbk
264392799441059917801Island text2.014422.796136.7097Neighbours21BLASTN+IslandViewer 4392799.gbk
274422314*444059918286Island text1.8262921.397734.4134Neighbours21BLASTN+4422314.gbk
284511738454807236335Island text1.8984624.46836.1425Neighbours21BLASTN4511738.gbk
294565467*458792622460Island text1.6501223.563537.607Neighbours21BLASTN+4565467.gbk