Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_014762: Sulfuricurvum kujiense DSM 16994 chromosome, complete genome

NCBI: NC_014762

Host Lineage: Sulfuricurvum kujiense; Sulfuricurvum; Helicobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: Country: Japan; Isolation: Drain water from an underground crude-oil; Temp: Mesophile; Temp: 25C. This is a facultatively anaerobic, chemolithoautotrophic, sulfur-oxidizing bacterium, isolated from an underground crude-oil storage cavity at Kuji in Iwate, Japan.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
189091491350022587Island text2.4436529.004525.8718Neighbours370BLASTN+890914.gbk
21204584123613631553Island text1.4809933.505648.6417Neighbours370BLASTN1204584.gbk
31334206136424630041Island text2.2677629.721826.6734NeighboursBLASTN1334206.gbk
41715190*173884923660Island text1.9162426.644626.1542Neighbours211715190.gbk
52428721*245871529995Island text2.2044628.96420.104Neighbours21BLASTN+IslandViewer 2428721.gbk