Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014632: Ilyobacter polytropus DSM 2926 chromosome, complete genome

NCBI: NC_014632

Host Lineage: Ilyobacter polytropus; Ilyobacter; Fusobacteriaceae; Fusobacteriales; Fusobacteria; Bacteria

General Information: Country: Germany; Environment: Marine; Isolation: Marine mud from Germany; Temp: Mesophile; Temp: 30C. Ilyobacter polytropus was isolated from anoxic marine mud. This organism is able to ferment 3-hydroxybutyrate, crotonate, glycerol and other compounds.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
111925*3391821994Island text2.0282123.925636.7828Neighbours21BLASTN+11925.gbk
211342013345820039Island text2.2254823.937638.9268Neighbours21BLASTN113420.gbk
331200033108619087Island text2.1683625.050940.642Neighbours21BLASTN+312000.gbk
433600035424618247Island text3.5495527.057649.9069Neighbours21BLASTN+336000.gbk
5402500*42142618927Island text1.9719424.317537.8426BLASTN+402500.gbk
6567289*59107223784Island text1.6095422.920731.6908Neighbours21BLASTN+567289.gbk
71112733114960436872Island text2.6709123.881346.0501Neighbours21BLASTN+1112733.gbk
81248611*127410325493Island text1.9361222.607642.7153Neighbours21BLASTN1248611.gbk
91404000*142613022131Island text2.5933727.341243.0278Neighbours21BLASTN+1404000.gbk
101514500153359919100Island text2.2617426.542139.9116Neighbours21BLASTN1514500.gbk
111914500*194862034121Island text2.2316422.337136.8803Neighbours21BLASTN+1914500.gbk