Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014552: Mycoplasma fermentans JER chromosome, complete genome

NCBI: NC_014552

Host Lineage: Mycoplasma fermentans; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: Mycoplasma fermentans has been isolated from the respiratory and urogenital tract, primarily from immunocompromised patients and may be a factor in the progression of HIV infection to AIDS. In addition this organism can be detected in the blood and joints of patients with rheumatoid arthritis.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
127751030009922590Island text1.4501217.217929.1509Neighbours21BLASTN277510.gbk