Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014541: Ferrimonas balearica DSM 9799 chromosome, complete genome

NCBI: NC_014541

Host Lineage: Ferrimonas balearica; Ferrimonas; Ferrimonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Country: Spain; Environment: Fresh water, Marine; Isolation: Surface sediment in harbor of Palma de Mallorca harbor; Temp: Mesophile; Temp: 28C. Ferrimonas balearica was isolated from harbor sediment from Palma de Mallorca, Spain. This organism is able to reduce iron.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1475350*53312757778Island text2.47838.110938.1121Neighbours11BLASTN+475350.gbk
2643604*66816624563Island text2.2829637.119846.278Neighbours11BLASTN+643604.gbk
31165991120221836228Island text5.3444451.404336.2003Neighbours53BLASTN+1165991.gbk
41231021125347822458Island text1.7417130.698125.8971Neighbours11BLASTN+1231021.gbk
51280835130859927765Island text2.0553435.22437.4169BLASTN+1280835.gbk
61414627144361328987Island text3.0323743.068527.5749Neighbours11BLASTN+1414627.gbk
71617678164056322886Island text1.5559927.659425.734Neighbours11BLASTN+1617678.gbk
81753776178218228407Island text3.4096242.727235.1635Neighbours11BLASTN+1753776.gbk
91996811202159924789Island text2.2408332.18332.54Neighbours11BLASTN+1996811.gbk
102122788214364020853Island text1.6652528.71322.3586Neighbours11BLASTN+2122788.gbk
112325780234809922320Island text1.9061130.895736.4673Neighbours11BLASTN+2325780.gbk
122510819*253430723489Island text2.3766837.683337.0743Neighbours11BLASTN+2510819.gbk
132736641275872122081Island text1.6775428.372744.9405Neighbours11BLASTN2736641.gbk
142978500299617417675Island text1.5335327.127929.8392Neighbours11BLASTN+2978500.gbk
153642241*367858636346Island text1.9542934.085631.2037Neighbours11BLASTN+3642241.gbk
163927500394969522196Island text1.6524532.200537.7377Neighbours11BLASTN+3927500.gbk
174167916419249724582Island text2.5058537.342332.2046Neighbours11BLASTN+4167916.gbk