Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014533: Cyanothece sp. PCC 7822 plasmid Cy782201, complete sequence

NCBI: NC_014533

Host Lineage: Cyanothece; Cyanothece; ; Chroococcales; Cyanobacteria; Bacteria

General Information: Country: India; Environment: Fresh water; Isolation: Rice fields in Cuttack, Orissa, India; Temp: Mesophile.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
111227412274Island text1.8296333.208234.2444BLASTN1.gbk
241650043609919600Island text1.5171835.494941.3546BLASTN416500.gbk
357918659968820503Island text1.8412428.659344.9188579186.gbk