Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014502: Cyanothece sp. PCC 7822 plasmid Cy782203, complete sequence

NCBI: NC_014502

Host Lineage: Cyanothece; Cyanothece; ; Chroococcales; Cyanobacteria; Bacteria

General Information: Country: India; Environment: Fresh water; Isolation: Rice fields in Cuttack, Orissa, India; Temp: Mesophile.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
111383913639022552Island text1.3418227.182635.5464Neighbours21BLASTN+113839.gbk