Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_014497: Candidatus Zinderia insecticola CARI chromosome, complete genome

NCBI: NC_014497

Host Lineage: Zinderia insecticola; Zinderia; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Insect symbiont. Zinderia insecticola, a Betaproteobacteria, is a co-endosymbiont with Sulcia muelleri in the spittlebug Clastoptera arizonana. Candidatus Zinderia insecticola is a family of Gram-negative bacteria in the order Burkholderiales.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
11*1182411824Island text2.1848615.228921.3079Neighbours21BLASTN1.gbk
2180000*20623126232Island text2.3517511.517416.2411Neighbours21BLASTN180000.gbk