Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_014472: Flavobacteriales bacterium HTCC2170 chromosome, complete genome

NCBI: NC_014472

Host Lineage: Maribacter; Maribacter; Flavobacteriaceae; Flavobacteriales; Bacteroidetes; Bacteria

General Information: Facultative aerobic, chemoorganotrophic Gram-negative bacterium. This strain was collected from the coastal area of Newport, Oregon, USA at a depth of 10 meters.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1294775*32159926825Island text2.5877229.359644.3321Neighbours21BLASTN294775.gbk
2791855*81570223848Island text1.5039919.702828.1895Neighbours21BLASTN791855.gbk
3941453*96615824706Island text1.4681419.754830.0015Neighbours21BLASTN941453.gbk
42275254*230059925346Island text2.5277927.241239.5694Neighbours21BLASTN2275254.gbk
53530274*355430524032Island text1.4083720.531433.3658Neighbours21BLASTN3530274.gbk
63785319*381026924951Island text1.5569926.697840.1099Neighbours21BLASTN3785319.gbk